Burkholderia cenocepacia J2315, BCAL0246 (rplE)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL0246
NCBI Locus Tag	QU43_RS37765
Name	rplE
Replicon	chromosome 1
Genomic location	280988 - 281527 (+ strand)

Cross-References

RefSeq	WP_006482882.1
GI	206558653
Entrez	6934080
GI	206558653
INSDC	CAR50557.1
NCBI Locus Tag	QU43_RS37765
NCBI Old Locus Tag	BCAL0246
RefSeq	WP_006482882.1,GeneID
UniParc	UPI0000599ADE
UniProtKB Acc	B4E5D2
UniProtKB ID	RL5_BURCJ
UniRef100	UniRef100_B1YRP1
UniRef50	UniRef50_P08895
UniRef90	UniRef90_A3MRW6

Product

Feature Type	CDS
Coding Frame	1
Product Name	50S ribosomal protein L5
Synonyms
Evidence for Translation
Charge (pH 7)	10.99
Kyte-Doolittle Hydrophobicity Value	-0.130
Molecular Weight (kDa)	20041.3
Isoelectric Point (pI)	10.49

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 665 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000269 (655 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL0246 Search term: rplE Search term: 50S ribosomal protein L5

Human Homologs

References