Burkholderia pseudomallei 1710b, BURPS1710b_A0575 (bsaY)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Burkholderia pseudomallei 1710b
GCF_000012785.1|latest
Locus Tag
BURPS1710b_A0575
NCBI Locus TagBURPS1710B_RS21350
Name
bsaY
Replicon chromosome II
Genomic location 769042 - 769797 (- strand)

Cross-References

RefSeq YP_335734.1
GI 76819134
Entrez 3692519
GI 76819134
INSDC ABA53081.1
NCBI Locus Tag BURPS1710B_RS21350
NCBI Old Locus Tag BURPS1710b_A0575
RefSeq YP_335734.1
UniParc UPI00005C38B4
UniProtKB Acc Q3JL19
UniProtKB ID Q3JL19_BURP1
UniRef100 UniRef100_Q62B04
UniRef50 UniRef50_Q2T714
UniRef90 UniRef90_Q2T714

Product

Feature Type CDS
Coding Frame 1
Product Name
type III secretion protein SpaR/YscT/HrcT
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) -1.61
Kyte-Doolittle Hydrophobicity Value 0.991
Molecular Weight (kDa) 26324.7
Isoelectric Point (pI) 6.51

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Flagellar
Note: This is based on PSORTb V3.0 secondary localization prediction
Class 3
Additional evidence for subcellular localization

Virulence Evidence

Source 1
Database VFDB : VF0428
Category T3SS-3
Evidence ECO:0000250
sequence similarity evidence used in manual assertion
Host Organism
Notes
Annotation transferred from Burkholderia pseudomallei K96243
Reference 17984080

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 210 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG019838 (324 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BURPS1710b_A0575
Search term: bsaY

References

Unraveling type III secretion systems in the highly versatile Burkholderia pseudomallei.
Sun GW, Gan YH
Trends Microbiol 2010 Dec;18(12):561-8
PubMed ID: 20951592