Burkholderia pseudomallei 1710b, BURPS1710b_A0570 (bipC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Burkholderia pseudomallei 1710b
GCF_000012785.1|latest
Locus Tag
BURPS1710b_A0570
NCBI Locus TagBURPS1710B_RS21330
Name
bipC
Replicon chromosome II
Genomic location 763980 - 765239 (- strand)

Cross-References

RefSeq WP_004528816.1
GI 76817906
Entrez 3693205
GI 76817906
INSDC ABA51853.1
NCBI Locus Tag BURPS1710B_RS21330
NCBI Old Locus Tag BURPS1710b_A0570
RefSeq WP_004528816.1
UniParc UPI00005C38B0
UniProtKB Acc Q3JL24
UniProtKB ID BIPC_BURP1
UniRef100 UniRef100_Q3JL24
UniRef50 UniRef50_A3MCG9
UniRef90 UniRef90_A3MCG9

Product

Feature Type CDS
Coding Frame 1
Product Name
putative cell invasion protein
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) 5.63
Kyte-Doolittle Hydrophobicity Value -0.575
Molecular Weight (kDa) 44264.1
Isoelectric Point (pI) 9.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

Virulence Evidence

Source 1
Database VFDB : VF0428
Category T3SS-3
Evidence ECO:0000250
sequence similarity evidence used in manual assertion
Host Organism
Notes
Annotation transferred from Burkholderia pseudomallei K96243
Reference 17984080

Pathogen Association Analysis

Results
Pathogenic
Found only in pathogenic strains
Hits to this gene were found in 2 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG019833 (317 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BURPS1710b_A0570
Search term: bipC

References

Unraveling type III secretion systems in the highly versatile Burkholderia pseudomallei.
Sun GW, Gan YH
Trends Microbiol 2010 Dec;18(12):561-8
PubMed ID: 20951592