Burkholderia pseudomallei 1106a, BURPS1106A_0007 (gspD)

Gene Feature Overview

Strain	Burkholderia pseudomallei 1106a GCF_000015925.1|latest
Locus Tag	BURPS1106A_0007
NCBI Locus Tag	BURPS1106A_RS00035
Name	gspD
Replicon	chromosome I
Genomic location	8395 - 10668 (+ strand)

Cross-References

RefSeq	WP_004525769.1
GI	126454161
Entrez	4899846
GI	126454161
INSDC	ABN91343.1
NCBI Locus Tag	BURPS1106A_RS00035
NCBI Old Locus Tag	BURPS1106A_0007
RefSeq	WP_004525769.1
UniParc	UPI0000F28C59
UniProtKB Acc	A3NPM1
UniProtKB ID	A3NPM1_BURP0
UniRef100	UniRef100_A9YYJ2
UniRef50	UniRef50_A1V993
UniRef90	UniRef90_A1V993

Product

Feature Type	CDS
Coding Frame	1
Product Name	general secretion pathway protein D
Synonyms
Evidence for Translation
Charge (pH 7)	3.22
Kyte-Doolittle Hydrophobicity Value	-0.099
Molecular Weight (kDa)	78324.7
Isoelectric Point (pI)	8.98

Subcellular localization

Individual Mappings	Localization Confidence PMID Outer Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 343 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000049 (640 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BURPS1106A_0007 Search term: gspD Search term: general secretion pathway protein D

Human Homologs

References

Molecular characterization of genetic loci required for secretion of exoproducts in Burkholderia pseudomallei. DeShazer D, Brett PJ, Burtnick MN, Woods DE J Bacteriol 1999 Aug;181(15):4661-4 PubMed ID: 10419967