Burkholderia mallei NCTC 10247, BMA10247_A0775 (bopC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Burkholderia mallei NCTC 10247
GCF_000015625.1|latest
Locus Tag
BMA10247_A0775
NCBI Locus TagBMA10247_RS03175
Name
bopC
Replicon chromosome II
Genomic location 713047 - 714540 (+ strand)

Cross-References

RefSeq WP_011857783.1
GI 126446136
Entrez 4891225
GI 126446136
NCBI Locus Tag BMA10247_RS03175
NCBI Old Locus Tag BMA10247_A0775
RefSeq WP_011857783.1
UniProtKB Acc A3MCJ0
UniProtKB ID A3MCJ0_BURM7

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) -1.25
Kyte-Doolittle Hydrophobicity Value -0.367
Molecular Weight (kDa) 54423.4
Isoelectric Point (pI) 6.84

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Virulence Evidence

Source 1
Database VFDB : VF0428
Category T3SS-3
Evidence ECO:0000250
sequence similarity evidence used in manual assertion
Host Organism
Notes
Annotation transferred from Burkholderia pseudomallei K96243
Reference 17984080

Pathogen Association Analysis

Results
Pathogenic
Found only in pathogenic strains
Hits to this gene were found in 3 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG020942 (270 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BMA10247_A0775
Search term: bopC

Human Homologs

References

Unraveling type III secretion systems in the highly versatile Burkholderia pseudomallei.
Sun GW, Gan YH
Trends Microbiol 2010 Dec;18(12):561-8
PubMed ID: 20951592