Burkholderia ambifaria MC40-6, BamMC406_2576 (deh4p)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in GBrowse

Gene Feature Overview

Strain Burkholderia ambifaria MC40-6
GCF_000019925.1|latest
Locus Tag
BamMC406_2576
NCBI Locus TagBAMMC406_RS13040
Name
deh4p
Replicon chromosome 1
Genomic location 2859930 - 2861588 (+ strand)

Cross-References

RefSeq WP_012364631.1
GI 172061617
Entrez 6178955
GI 172061617
INSDC ACB65053.1
NCBI Locus Tag BAMMC406_RS13040
NCBI Old Locus Tag BamMC406_2576
RefSeq WP_012364631.1
UniParc UPI0000E91597
UniProtKB Acc B1YVZ2
UniProtKB ID B1YVZ2_BURA4
UniRef100 UniRef100_B1YVZ2
UniRef50 UniRef50_Q7CWX7
UniRef90 UniRef90_A1V6W2

Product

Feature Type CDS
Coding Frame 1
Product Name
general substrate transporter
Product Name Confidence: Class 2
Synonyms putative haloacid permease, Deh4p
Evidence for Translation
Charge (pH 7) 13.09
Kyte-Doolittle Hydrophobicity Value 0.628
Molecular Weight (kDa) 59110.8
Isoelectric Point (pI) 9.73

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 344 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002512 (652 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BamMC406_2576
Search term: deh4p

References

Isolation and characterization of a novel haloacid permease from Burkholderia cepacia MBA4.
Yu M, Faan YW, Chung WY, Tsang JS.
Appl Environ Microbiol. 2007 Aug;73(15):4874-80.
PubMed ID: 17545323