Burkholderia cenocepacia MC0-3, Bcenmc03_6984 (prnB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Burkholderia cenocepacia MC0-3
GCF_000019505.1|latest
Locus Tag
Bcenmc03_6984
NCBI Locus TagBCENMC03_RS34855
Name
prnB
Replicon chromosome 3
Genomic location 1097010 - 1098101 (+ strand)

Cross-References

RefSeq WP_012337445.1
GI 170735466
Entrez 6125893
GI 170735466
INSDC ACA96085.1
NCBI Locus Tag BCENMC03_RS34855
NCBI Old Locus Tag Bcenmc03_6984
RefSeq WP_012337445.1
UniParc UPI0000E90095
UniProtKB Acc B1K9Y5
UniProtKB ID B1K9Y5_BURCC
UniRef100 UniRef100_B1K9Y5
UniRef50 UniRef50_P95481
UniRef90 UniRef90_A0A0A3KK88

Product

Feature Type CDS
Coding Frame 1
Product Name
PrnB
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) -0.98
Kyte-Doolittle Hydrophobicity Value 0.152
Molecular Weight (kDa) 39478.0
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 10 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG015297 (385 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Bcenmc03_6984
Search term: prnB
Search term: PrnB

References

Diversity of cultivated endophytic bacteria from sugarcane: genetic and biochemical characterization of Burkholderia cepacia complex isolates.
Mendes R, Pizzirani-Kleiner AA, Araujo WL, Raaijmakers JM
Appl Environ Microbiol 2007 Nov;73(22):7259-67
PubMed ID: 17905875