Burkholderia cenocepacia MC0-3, Bcenmc03_1844

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Burkholderia cenocepacia MC0-3
GCF_000019505.1|latest
Locus Tag
Bcenmc03_1844
NCBI Locus TagBCENMC03_RS09285
Name
Replicon chromosome 1
Genomic location 2049944 - 2051032 (- strand)

Cross-References

RefSeq WP_011694300.1
GI 170733180
Entrez 6123508
GI 170733180
INSDC ACA91005.1
NCBI Locus Tag BCENMC03_RS09285
NCBI Old Locus Tag Bcenmc03_1844
RefSeq WP_011694300.1
UniParc UPI000052D65B
UniProtKB Acc B1JTA0
UniProtKB ID B1JTA0_BURCC
UniRef100 UniRef100_B1JTA0
UniRef50 UniRef50_Q0K953
UniRef90 UniRef90_C5AFI3

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor RpoS
Synonyms
Evidence for Translation
Charge (pH 7) -14.56
Kyte-Doolittle Hydrophobicity Value -0.636
Molecular Weight (kDa) 41124.6
Isoelectric Point (pI) 4.95

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001657 (653 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Bcenmc03_1844

Human Homologs

References

Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability.
Menard A, de Los Santos PE, Graindorge A, Cournoyer B
BMC Genomics 2007 Sep 4;8:308
PubMed ID: 17784948