Strain |
Burkholderia vietnamiensis G4
GCF_000016205.1|latest |
Locus Tag |
Bcep1808_1046
|
NCBI Locus Tag | BCEP1808_RS05275 |
Name |
ecfA1
|
Replicon | chromosome 1 |
Genomic location | 1130662 - 1131261 (+ strand) |
RefSeq | WP_011883961.1 |
GI | 134295157 |
Entrez | 4952752 |
GI | 134295157 |
INSDC | ABO54057.1 |
NCBI Locus Tag | BCEP1808_RS05275 |
NCBI Old Locus Tag | Bcep1808_1046 |
RefSeq | WP_011883961.1 |
UniParc | UPI00003A5F87 |
UniProtKB Acc | A4JCQ4 |
UniProtKB ID | A4JCQ4_BURVG |
UniRef100 | UniRef100_A4JCQ4 |
UniRef50 | UniRef50_D0ZSY9 |
UniRef90 | UniRef90_Q2SXU1 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RNA polymerase sigma factor RpoE
|
Synonyms |
sigma factor 70 EcfA1 |
Evidence for Translation | |
Charge (pH 7) | -2.79 |
Kyte-Doolittle Hydrophobicity Value | -0.386 |
Molecular Weight (kDa) | 22636.6 |
Isoelectric Point (pI) | 5.21 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 496 genera
|
Burkholderia Ortholog Group |
BG000968 (655 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: Bcep1808_1046
Search term: ecfA1
Search term: RNA polymerase sigma factor RpoE
|
Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability.
Menard A, de Los Santos PE, Graindorge A, Cournoyer B
BMC Genomics 2007 Sep 4;8:308
PubMed ID: 17784948
|