Burkholderia vietnamiensis G4, Bcep1808_0231 (fliA)

Gene Feature Overview

Strain	Burkholderia vietnamiensis G4 GCF_000016205.1|latest
Locus Tag	Bcep1808_0231
NCBI Locus Tag	BCEP1808_RS01125
Name	fliA
Replicon	chromosome 1
Genomic location	258896 - 259630 (+ strand)

Cross-References

RefSeq	WP_011882921.1
GI	134294347
Entrez	4951908
GI	134294347
INSDC	ABO53247.1
NCBI Locus Tag	BCEP1808_RS01125
NCBI Old Locus Tag	Bcep1808_0231
RefSeq	WP_011882921.1
UniParc	UPI0000532CF9
UniProtKB Acc	A4JAE4
UniProtKB ID	A4JAE4_BURVG
UniRef100	UniRef100_A4JAE4
UniRef50	UniRef50_B2JJ28
UniRef90	UniRef90_B1YR52

Product

Feature Type	CDS
Coding Frame	1
Product Name	flagellar biosynthesis sigma factor
Synonyms
Evidence for Translation
Charge (pH 7)	-10.34
Kyte-Doolittle Hydrophobicity Value	-0.466
Molecular Weight (kDa)	27850.2
Isoelectric Point (pI)	4.85

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 587 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000177 (655 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Bcep1808_0231 Search term: fliA Search term: flagellar biosynthesis sigma factor

Human Homologs

References

Architecture of Burkholderia cepacia complex sigma70 gene family: evidence of alternative primary and clade-specific factors, and genomic instability. Menard A, de Los Santos PE, Graindorge A, Cournoyer B BMC Genomics 2007 Sep 4;8:308 PubMed ID: 17784948