Burkholderia vietnamiensis G4, Bcep1808_5260 (cepR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia vietnamiensis G4
GCF_000016205.1|latest
Locus Tag
Bcep1808_5260
NCBI Locus TagBCEP1808_RS26200
Name
cepR
Replicon chromosome 2
Genomic location 2191597 - 2192316 (- strand)

Cross-References

RefSeq WP_011882532.1
GI 134293938
Entrez 4951478
GI 134293938
INSDC ABO58209.1
NCBI Locus Tag BCEP1808_RS26200
NCBI Old Locus Tag Bcep1808_5260
RefSeq WP_011882532.1
UniParc UPI0000F59580
UniProtKB Acc A4JPK6
UniProtKB ID A4JPK6_BURVG
UniRef100 UniRef100_A4JPK6
UniRef50 UniRef50_P58590
UniRef90 UniRef90_B4EMD0

Product

Feature Type CDS
Coding Frame 1
Product Name
LuxR family transcriptional regulator
Product Name Confidence: Class 1
Synonyms transcriptional regulator CepR
Evidence for Translation
Charge (pH 7) -3.20
Kyte-Doolittle Hydrophobicity Value -0.039
Molecular Weight (kDa) 26650.2
Isoelectric Point (pI) 5.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Unknown Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 350 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG003718 (1367 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Bcep1808_5260
Search term: cepR

Human Homologs

References

Distribution of quorum-sensing genes in the Burkholderia cepacia complex.
Lutter E, Lewenza S, Dennis JJ, Visser MB, Sokol PA
Infect Immun 2001 Jul;69(7):4661-6
PubMed ID: 11402012