Strain |
Burkholderia thailandensis E264 ATCC 700388
GCF_000012365.1|latest |
Locus Tag |
BTH_I1403
|
NCBI Locus Tag | BTH_RS19345 |
Name |
scmR
|
Replicon | chromosome I |
Genomic location | 1579170 - 1580150 (- strand) |
Transposon Mutants | 3 transposon mutants in E264 ATCC 700388 |
RefSeq | YP_441949.1 |
GI | 83719799 |
Entrez | 3848481 |
GI | 83719799 |
INSDC | AIP25050.1 |
NCBI Locus Tag | BTH_RS19345 |
NCBI Old Locus Tag | BTH_I1403 |
RefSeq | WP_009889425.1 |
UniParc | UPI000066808A |
UniProtKB Acc | Q2SYQ0 |
UniProtKB ID | Q2SYQ0_BURTA |
UniRef100 | UniRef100_Q2SYQ0 |
UniRef50 | UniRef50_A9AFM0 |
UniRef90 | UniRef90_A3NYM3 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
secondary metabolite regulator, ScmR
|
Synonyms |
LysR family transcriptional regulator |
Evidence for Translation | |
Charge (pH 7) | 3.00 |
Kyte-Doolittle Hydrophobicity Value | -0.115 |
Molecular Weight (kDa) | 35888.6 |
Isoelectric Point (pI) | 7.72 |
Individual Mappings | |
Additional evidence for subcellular localization |
Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 474 genera
|
Burkholderia Ortholog Group |
BG000688 (636 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BTH_I1403
Search term: scmR
Search term: secondary metabolite regulator, ScmR
|
Discovery of <i>scmR</i> as a global regulator of secondary metabolism and virulence in <i>Burkholderia thailandensis</i> E264.
Mao D, Bushin LB, Moon K, Wu Y, Seyedsayamdost MR
Proc Natl Acad Sci U S A 2017 Apr 4;114(14):E2920-E2928
PubMed ID: 28320949
|