Burkholderia pseudomallei K96243, BPSS2097 (TssE-6)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSS2097
Name
TssE-6
Replicon chromosome 2
Genomic location 2839424 - 2839960 (- strand)

Cross-References

RefSeq YP_112096.1
GI 53723111
Entrez 3095468
GI 53723111
INSDC CAH39577.1
NCBI Locus Tag BPSS2097
RefSeq YP_112096.1,GeneID
UniParc UPI000043BF47
UniProtKB Acc Q63IH6
UniProtKB ID Q63IH6_BURPS
UniRef100 UniRef100_A3P951
UniRef50 UniRef50_Q2T8N6
UniRef90 UniRef90_Q2T8N6

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Charge (pH 7) -1.80
Kyte-Doolittle Hydrophobicity Value -0.224
Molecular Weight (kDa) 19379.8
Isoelectric Point (pI) 6.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 47 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG016584 (507 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS2097
Search term: TssE-6

References

In vivo expression technology identifies a type VI secretion system locus in Burkholderia pseudomallei that is induced upon invasion of macrophages.
Shalom G, Shaw JG, Thomas MS
Microbiology 2007 Aug;153(Pt 8):2689-2699
PubMed ID: 17660433