Burkholderia pseudomallei K96243, BPSS1853

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSS1853
Name
Replicon chromosome 2
Genomic location 2518209 - 2519006 (- strand)

Cross-References

RefSeq YP_111857.1
GI 53722872
Entrez 3094931
GI 53722872
INSDC CAH39329.1
NCBI Locus Tag BPSS1853
RefSeq YP_111857.1,GeneID
UniParc UPI000043BE5A
UniProtKB Acc Q63J65
UniProtKB ID Q63J65_BURPS
UniRef100 UniRef100_A3P881
UniRef50 UniRef50_B9BGS6
UniRef90 UniRef90_N0ANX0

Product

Feature Type CDS
Coding Frame 1
Product Name
short chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) 1.11
Kyte-Doolittle Hydrophobicity Value 0.154
Molecular Weight (kDa) 27853.6
Isoelectric Point (pI) 7.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 651 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG003028 (1147 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS1853

Human Homologs

Ensembl 97, assembly GRCh38.p12
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value: 1.0e-28
Percent Identity: 34.4

Human Homologs

Ensembl 97, assembly GRCh38.p12
dehydrogenase/reductase 4 [Source:HGNC Symbol;Acc:HGNC:16985]
E-value: 1.0e-28
Percent Identity: 34.4

References

No references are associated with this feature.