Burkholderia pseudomallei K96243, BPSS1697 (trpA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSS1697
Name
trpA
Replicon chromosome 2
Genomic location 2331539 - 2332354 (- strand)

Cross-References

RefSeq YP_111702.1
GI 53722717
Entrez 3096324
GI 53722717
INSDC CAH39170.1
NCBI Locus Tag BPSS1697
RefSeq YP_111702.1,GeneID
UniParc UPI000043BDBF
UniProtKB Acc Q63JM0
UniProtKB ID TRPA_BURPS
UniRef100 UniRef100_Q63JM0
UniRef50 UniRef50_Q74AI3
UniRef90 UniRef90_Q2T7G9

Product

Feature Type CDS
Coding Frame 1
Product Name
tryptophan synthase subunit alpha
Synonyms
Evidence for Translation
Detected in B. pseudomallei strain 844 using MALDI-TOF/MS analysis (26.5 kDa, pI 5.19, PMID:21960737)
Charge (pH 7) -4.28
Kyte-Doolittle Hydrophobicity Value 0.234
Molecular Weight (kDa) 27977.7
Isoelectric Point (pI) 5.14

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 583 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG003095 (653 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS1697
Search term: trpA

Human Homologs

References

No references are associated with this feature.