Burkholderia pseudomallei K96243, BPSS1652

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSS1652
Name
Replicon chromosome 2
Genomic location 2270441 - 2271439 (- strand)

Cross-References

RefSeq YP_111658.1
GI 53722673
Entrez 3095457
GI 53722673
INSDC CAH39126.1
NCBI Locus Tag BPSS1652
RefSeq YP_111658.1,GeneID
UniParc UPI000043BD93
UniProtKB Acc Q63JR4
UniProtKB ID Q63JR4_BURPS
UniRef100 UniRef100_C4I7F4
UniRef50 UniRef50_A1UZA1
UniRef90 UniRef90_A1UZA1

Product

Feature Type CDS
Coding Frame 1
Product Name
patatin-like protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.40
Kyte-Doolittle Hydrophobicity Value 0.107
Molecular Weight (kDa) 35375.6
Isoelectric Point (pI) 5.39

Subcellular localization

Individual Mappings
Localization Confidence PMID
Unknown Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 87 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG018490 (400 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSS1652

Human Homologs

Ensembl 97, assembly GRCh38.p12
phospholipase A2 group VI [Source:HGNC Symbol;Acc:HGNC:9039]
E-value: 3.0e-09
Percent Identity: 29.7

Human Homologs

Ensembl 97, assembly GRCh38.p12
phospholipase A2 group VI [Source:HGNC Symbol;Acc:HGNC:9039]
E-value: 3.0e-09
Percent Identity: 29.7

Human Homologs

Ensembl 97, assembly GRCh38.p12
phospholipase A2 group VI [Source:HGNC Symbol;Acc:HGNC:9039]
E-value: 3.0e-09
Percent Identity: 29.7

Human Homologs

Ensembl 97, assembly GRCh38.p12
phospholipase A2 group VI [Source:HGNC Symbol;Acc:HGNC:9039]
E-value: 3.0e-09
Percent Identity: 29.7

Human Homologs

Ensembl 97, assembly GRCh38.p12
phospholipase A2 group VI [Source:HGNC Symbol;Acc:HGNC:9039]
E-value: 3.0e-09
Percent Identity: 29.7

Human Homologs

Ensembl 97, assembly GRCh38.p12
phospholipase A2 group VI [Source:HGNC Symbol;Acc:HGNC:9039]
E-value: 3.0e-09
Percent Identity: 29.7

Human Homologs

Ensembl 97, assembly GRCh38.p12
phospholipase A2 group VI [Source:HGNC Symbol;Acc:HGNC:9039]
E-value: 3.0e-09
Percent Identity: 29.7

Human Homologs

Ensembl 97, assembly GRCh38.p12
phospholipase A2 group VI [Source:HGNC Symbol;Acc:HGNC:9039]
E-value: 3.0e-09
Percent Identity: 29.7

Human Homologs

Ensembl 97, assembly GRCh38.p12
phospholipase A2 group VI [Source:HGNC Symbol;Acc:HGNC:9039]
E-value: 3.0e-09
Percent Identity: 29.7

References

No references are associated with this feature.