Burkholderia pseudomallei K96243, BPSL3400 (atpF)

Gene Feature Overview

Strain	Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1 GCF_000011545.1|latest
Locus Tag	BPSL3400
Name	atpF
Replicon	chromosome 1
Genomic location	4039194 - 4039634 (- strand)

Cross-References

RefSeq	YP_109993.1
GI	53721007
Entrez	3092776
GI	53721007
INSDC	CAH37412.1
NCBI Locus Tag	BPSL3400
RefSeq	YP_109993.1,GeneID
UniParc	UPI0000441008
UniProtKB Acc	Q63PH6
UniProtKB ID	ATPF_BURPS
UniRef100	UniRef100_A3MQJ5
UniRef50	UniRef50_A9BPU3
UniRef90	UniRef90_Q13SP8

Product

Feature Type	CDS
Coding Frame	1
Product Name	ATP synthase F0F1 subunit B
Synonyms
Evidence for Translation
Charge (pH 7)	-0.52
Kyte-Doolittle Hydrophobicity Value	-0.249
Molecular Weight (kDa)	16017.2
Isoelectric Point (pI)	6.55

Subcellular localization

Individual Mappings	Localization Confidence PMID Extracellular Class 1 quantitative mass spectrometry evidence 25635268 Cytoplasmic Membrane Class 3 20472543 Extracellular Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 335 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG000088 (654 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BPSL3400 Search term: atpF Search term: ATP synthase F0F1 subunit B

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants. Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM Mol Cell Proteomics 2015 Apr;14(4):905-16 PubMed ID: 25635268