Burkholderia pseudomallei K96243, BPSL3223 (rplJ)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL3223
Name
rplJ
Replicon chromosome 1
Genomic location 3825356 - 3825853 (- strand)

Cross-References

RefSeq YP_109817.1
GI 53720831
Entrez 3093181
GI 53720831
INSDC CAH37234.1
NCBI Locus Tag BPSL3223
RefSeq YP_109817.1,GeneID
UniParc UPI000043B688
UniProtKB Acc Q63Q01
UniProtKB ID RL10_BURPS
UniRef100 UniRef100_A2S7G4
UniRef50 UniRef50_Q39KH7
UniRef90 UniRef90_Q39KH7

Product

Feature Type CDS
Coding Frame 1
Product Name
50S ribosomal protein L10
Synonyms
Evidence for Translation
Charge (pH 7) 5.23
Kyte-Doolittle Hydrophobicity Value 0.053
Molecular Weight (kDa) 17605.3
Isoelectric Point (pI) 10.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 1
quantitative mass spectrometry evidence
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000248 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL3223
Search term: rplJ

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268