Burkholderia pseudomallei K96243, BPSL3209 (rpsS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL3209
Name
rpsS
Replicon chromosome 1
Genomic location 3806089 - 3806364 (- strand)

Cross-References

RefSeq YP_109803.1
GI 53720817
Entrez 3091800
GI 53720817
INSDC CAH37220.1
NCBI Locus Tag BPSL3209
RefSeq YP_109803.1,GeneID
UniParc UPI00002A2D48
UniProtKB Acc Q63Q15
UniProtKB ID RS19_BURPS
UniRef100 UniRef100_B1YRD4
UniRef50 UniRef50_B1X504
UniRef90 UniRef90_Q1H4N3

Product

Feature Type CDS
Coding Frame 1
Product Name
30S ribosomal protein S19
Synonyms
Evidence for Translation
Charge (pH 7) 13.15
Kyte-Doolittle Hydrophobicity Value -0.433
Molecular Weight (kDa) 10107.8
Isoelectric Point (pI) 11.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 1
quantitative mass spectrometry evidence
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 665 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000261 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL3209
Search term: rpsS

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268