Burkholderia pseudomallei K96243, BPSL3189 (rpsK)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL3189
Name
rpsK
Replicon chromosome 1
Genomic location 3797060 - 3797461 (- strand)

Cross-References

RefSeq YP_109783.1
GI 53720797
Entrez 3091468
GI 53720797
INSDC CAH37200.1
NCBI Locus Tag BPSL3189
RefSeq YP_109783.1,GeneID
UniParc UPI00002841B5
UniProtKB Acc Q63Q35
UniProtKB ID RS11_BURPS
UniRef100 UniRef100_B1YRQ3
UniRef50 UniRef50_Q6N4V6
UniRef90 UniRef90_Q13TJ4

Product

Feature Type CDS
Coding Frame 1
Product Name
30S ribosomal protein S11
Synonyms
Evidence for Translation
Charge (pH 7) 16.91
Kyte-Doolittle Hydrophobicity Value -0.380
Molecular Weight (kDa) 14118.2
Isoelectric Point (pI) 11.97

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Extracellular Class 1
quantitative mass spectrometry evidence
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 664 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000281 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL3189
Search term: rpsK

Human Homologs

Ensembl 97, assembly GRCh38.p12
mitochondrial ribosomal protein S11 [Source:HGNC Symbol;Acc:HGNC:14050]
E-value: 5.7e-20
Percent Identity: 43.6

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268