Burkholderia pseudomallei K96243, BPSL2942 (omlA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL2942
Name
omlA
Replicon chromosome 1
Genomic location 3513232 - 3514056 (- strand)

Cross-References

RefSeq YP_109536.1
GI 53720550
Entrez 3093811
GI 53720550
NCBI Locus Tag BPSL2942
RefSeq YP_109536.1,GeneID
UniProtKB Acc Q63QT2
UniProtKB ID Q63QT2_BURPS

Product

Feature Type CDS
Coding Frame 1
Product Name
outer membrane protein
Synonyms
Evidence for Translation
Charge (pH 7) 5.44
Kyte-Doolittle Hydrophobicity Value -0.255
Molecular Weight (kDa) 28377.6
Isoelectric Point (pI) 10.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 1
quantitative mass spectrometry evidence
Extracellular Class 3
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 136 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000529 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL2942
Search term: omlA

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268