Burkholderia pseudomallei K96243, BPSL2911 (rplM)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL2911
Name
rplM
Replicon chromosome 1
Genomic location 3479748 - 3480176 (- strand)

Cross-References

RefSeq YP_109505.1
GI 53720519
Entrez 3093602
GI 53720519
INSDC CAH36921.1
NCBI Locus Tag BPSL2911
RefSeq YP_109505.1,GeneID
UniParc UPI000043B55A
UniProtKB Acc Q63QW3
UniProtKB ID RL13_BURPS
UniRef100 UniRef100_A3NZ80
UniRef50 UniRef50_A2C4X4
UniRef90 UniRef90_A3MP59

Product

Feature Type CDS
Coding Frame 1
Product Name
50S ribosomal protein L13
Synonyms
Evidence for Translation
Charge (pH 7) 13.42
Kyte-Doolittle Hydrophobicity Value -0.548
Molecular Weight (kDa) 15970.5
Isoelectric Point (pI) 10.49

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 1
quantitative mass spectrometry evidence
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 623 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000557 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL2911
Search term: rplM

Human Homologs

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268