Burkholderia pseudomallei K96243, BPSL2515 (rpsA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL2515
Name
rpsA
Replicon chromosome 1
Genomic location 3028413 - 3030125 (- strand)

Cross-References

RefSeq YP_109111.1
GI 53720125
Entrez 3093073
GI 53720125
INSDC CAH36522.1
NCBI Locus Tag BPSL2515
RefSeq YP_109111.1,GeneID
UniParc UPI000043B3F3
UniProtKB Acc Q63S06
UniProtKB ID Q63S06_BURPS
UniRef100 UniRef100_A0A069B3I6
UniRef50 UniRef50_P0AG69
UniRef90 UniRef90_B4EB40

Product

Feature Type CDS
Coding Frame 1
Product Name
30S ribosomal protein S1
Synonyms
Evidence for Translation
Charge (pH 7) -15.77
Kyte-Doolittle Hydrophobicity Value -0.292
Molecular Weight (kDa) 62307.1
Isoelectric Point (pI) 4.82

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Extracellular Class 1
quantitative mass spectrometry evidence
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 603 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000889 (653 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL2515
Search term: rpsA

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268