Burkholderia pseudomallei K96243, BPSL2390 (argD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL2390
Name
argD
Replicon chromosome 1
Genomic location 2886121 - 2887353 (- strand)

Cross-References

RefSeq YP_108982.1
GI 53719996
Entrez 3093428
GI 53719996
INSDC CAH36392.1
NCBI Locus Tag BPSL2390
RefSeq YP_108982.1,GeneID
UniParc UPI000043B375
UniProtKB Acc Q63SD4
UniProtKB ID Q63SD4_BURPS
UniRef100 UniRef100_Q3JQC2
UniRef50 UniRef50_P40732
UniRef90 UniRef90_A0A095JW67

Product

Feature Type CDS
Coding Frame 1
Product Name
bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase
Synonyms
Evidence for Translation
Charge (pH 7) -3.40
Kyte-Doolittle Hydrophobicity Value 0.055
Molecular Weight (kDa) 43715.7
Isoelectric Point (pI) 6.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Extracellular Class 1
quantitative mass spectrometry evidence
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 639 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001025 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL2390
Search term: argD

Human Homologs

Ensembl 97, assembly GRCh38.p12
alanine--glyoxylate aminotransferase 2 [Source:HGNC Symbol;Acc:HGNC:14412]
E-value: 2.5e-42
Percent Identity: 29.1

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268