Burkholderia pseudomallei K96243, BPSL1980 (valS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL1980
Name
valS
Replicon chromosome 1
Genomic location 2359584 - 2362451 (+ strand)

Cross-References

RefSeq YP_108578.1
GI 53719592
Entrez 3094083
GI 53719592
INSDC CAH35979.1
NCBI Locus Tag BPSL1980
RefSeq YP_108578.1,GeneID
UniParc UPI000043B1E3
UniProtKB Acc Q63TI8
UniProtKB ID SYV_BURPS
UniRef100 UniRef100_Q63TI8
UniRef50 UniRef50_Q63TI8
UniRef90 UniRef90_Q63TI8

Product

Feature Type CDS
Coding Frame 1
Product Name
valyl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -13.76
Kyte-Doolittle Hydrophobicity Value -0.261
Molecular Weight (kDa) 106725.0
Isoelectric Point (pI) 5.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Extracellular Class 1
quantitative mass spectrometry evidence
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 668 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001268 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL1980
Search term: valS

Human Homologs

Ensembl 97, assembly GRCh38.p12
valyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12651]
E-value: 1.1e-194
Percent Identity: 39.9

Human Homologs

Ensembl 97, assembly GRCh38.p12
valyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12651]
E-value: 1.1e-194
Percent Identity: 39.9

Human Homologs

Ensembl 97, assembly GRCh38.p12
valyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12651]
E-value: 1.1e-194
Percent Identity: 39.9

Human Homologs

Ensembl 97, assembly GRCh38.p12
valyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12651]
E-value: 1.1e-194
Percent Identity: 39.9

Human Homologs

Ensembl 97, assembly GRCh38.p12
valyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12651]
E-value: 1.1e-194
Percent Identity: 39.9

Human Homologs

Ensembl 97, assembly GRCh38.p12
valyl-tRNA synthetase [Source:HGNC Symbol;Acc:HGNC:12651]
E-value: 1.1e-194
Percent Identity: 39.9

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268