Burkholderia pseudomallei K96243, BPSL1555 (potF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL1555
Name
potF
Replicon chromosome 1
Genomic location 1804461 - 1805555 (+ strand)

Cross-References

RefSeq YP_108175.1
GI 53719189
Entrez 3091817
GI 53719189
INSDC CAH35556.1
NCBI Locus Tag BPSL1555
RefSeq YP_108175.1,GeneID
UniParc UPI000043B054
UniProtKB Acc Q63UP1
UniProtKB ID Q63UP1_BURPS
UniRef100 UniRef100_A0A069B8H1
UniRef50 UniRef50_A3NHA4
UniRef90 UniRef90_A0A069B8H1

Product

Feature Type CDS
Coding Frame 1
Product Name
putrescine-binding periplasmic protein
Synonyms
Evidence for Translation
Charge (pH 7) 8.61
Kyte-Doolittle Hydrophobicity Value -0.260
Molecular Weight (kDa) 40165.9
Isoelectric Point (pI) 9.35

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Extracellular Class 1
quantitative mass spectrometry evidence
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 306 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001584 (653 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL1555
Search term: potF

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268