Burkholderia pseudomallei K96243, BPSL1527 (tex)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL1527
Name
tex
Replicon chromosome 1
Genomic location 1767550 - 1769874 (- strand)

Cross-References

RefSeq YP_108147.1
GI 53719161
Entrez 3091541
GI 53719161
INSDC CAH35528.1
NCBI Locus Tag BPSL1527
RefSeq YP_108147.1,GeneID
UniParc UPI000043B038
UniProtKB Acc Q63UR9
UniProtKB ID Q63UR9_BURPS
UniRef100 UniRef100_Q3JRR9
UniRef50 UniRef50_Q45388
UniRef90 UniRef90_Q39FS3

Product

Feature Type CDS
Coding Frame 1
Product Name
transcription accessory protein
Synonyms
Evidence for Translation
Charge (pH 7) -3.89
Kyte-Doolittle Hydrophobicity Value -0.297
Molecular Weight (kDa) 84583.4
Isoelectric Point (pI) 6.48

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Extracellular Class 1
quantitative mass spectrometry evidence
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 606 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001635 (653 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL1527
Search term: tex

Human Homologs

Ensembl 97, assembly GRCh38.p12
S1 RNA binding domain 1 [Source:HGNC Symbol;Acc:HGNC:25521]
E-value: 7.8e-101
Percent Identity: 33.5

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268