Burkholderia pseudomallei K96243, BPSL1217

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL1217
Name
Replicon chromosome 1
Genomic location 1401623 - 1403953 (+ strand)

Cross-References

RefSeq YP_107839.1
GI 53718853
Entrez 3091552
GI 53718853
INSDC CAH35212.1
NCBI Locus Tag BPSL1217
RefSeq YP_107839.1,GeneID
UniParc UPI000043AF05
UniProtKB Acc Q63VM7
UniProtKB ID Q63VM7_BURPS
UniRef100 UniRef100_A0A095PNB5
UniRef50 UniRef50_I0HPG7
UniRef90 UniRef90_A1V2M2

Product

Feature Type CDS
Coding Frame 1
Product Name
NADH dehydrogenase subunit G
Synonyms
Evidence for Translation
Charge (pH 7) -2.27
Kyte-Doolittle Hydrophobicity Value -0.025
Molecular Weight (kDa) 83051.1
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 1
quantitative mass spectrometry evidence
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 529 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002130 (652 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL1217

Human Homologs

Ensembl 97, assembly GRCh38.p12
NADH:ubiquinone oxidoreductase core subunit S1 [Source:HGNC Symbol;Acc:HGNC:7707]
E-value: 2.9e-108
Percent Identity: 37.8
Ensembl 97, assembly GRCh38.p12
NADH:ubiquinone oxidoreductase core subunit S1 [Source:HGNC Symbol;Acc:HGNC:7707]
E-value: 2.9e-108
Percent Identity: 37.8
Ensembl 97, assembly GRCh38.p12
NADH:ubiquinone oxidoreductase core subunit S1 [Source:HGNC Symbol;Acc:HGNC:7707]
E-value: 2.9e-108
Percent Identity: 37.8
Ensembl 97, assembly GRCh38.p12
NADH:ubiquinone oxidoreductase core subunit S1 [Source:HGNC Symbol;Acc:HGNC:7707]
E-value: 2.9e-108
Percent Identity: 37.8
Ensembl 97, assembly GRCh38.p12
NADH:ubiquinone oxidoreductase core subunit S1 [Source:HGNC Symbol;Acc:HGNC:7707]
E-value: 2.9e-108
Percent Identity: 37.8
Ensembl 97, assembly GRCh38.p12
NADH:ubiquinone oxidoreductase core subunit S1 [Source:HGNC Symbol;Acc:HGNC:7707]
E-value: 2.9e-108
Percent Identity: 37.8

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268