Burkholderia pseudomallei K96243, BPSL0899 (clpA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL0899
Name
clpA
Replicon chromosome 1
Genomic location 1048414 - 1050714 (+ strand)

Cross-References

RefSeq YP_107526.1
GI 53718540
Entrez 3092761
GI 53718540
INSDC CAH34893.1
NCBI Locus Tag BPSL0899
RefSeq YP_107526.1,GeneID
UniParc UPI000043ADCE
UniProtKB Acc Q63WJ0
UniProtKB ID Q63WJ0_BURPS
UniRef100 UniRef100_Q3JV78
UniRef50 UniRef50_P0ABI1
UniRef90 UniRef90_Q3JV78

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent Clp protease ATP-binding subunit
Synonyms
Evidence for Translation
Detected in B. pseudomallei strain 844 using MALDI-TOF/MS analysis (29.0 kDa, pI 4.78, PMID:21960737)
Charge (pH 7) -6.25
Kyte-Doolittle Hydrophobicity Value -0.231
Molecular Weight (kDa) 84114.3
Isoelectric Point (pI) 6.44

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 605 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002384 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL0899
Search term: clpA

Human Homologs

Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 1.1e-35
Percent Identity: 28.2

Human Homologs

Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 1.1e-35
Percent Identity: 28.2

Human Homologs

Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 1.1e-35
Percent Identity: 28.2

Human Homologs

Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 1.1e-35
Percent Identity: 28.2

Human Homologs

Ensembl 97, assembly GRCh38.p12
ClpB homolog, mitochondrial AAA ATPase chaperonin [Source:HGNC Symbol;Acc:HGNC:30664]
E-value: 1.1e-35
Percent Identity: 28.2

References

No references are associated with this feature.