Burkholderia pseudomallei K96243, BPSL0644 (aspS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL0644
Name
aspS
Replicon chromosome 1
Genomic location 729466 - 731262 (+ strand)

Cross-References

RefSeq YP_107273.1
GI 53718287
Entrez 3092849
GI 53718287
INSDC CAH34637.1
NCBI Locus Tag BPSL0644
RefSeq YP_107273.1,GeneID
UniParc UPI000043ACD4
UniProtKB Acc Q63X93
UniProtKB ID SYDND_BURPS
UniRef100 UniRef100_A3MNU6
UniRef50 UniRef50_Q83BE5
UniRef90 UniRef90_Q145N3

Product

Feature Type CDS
Coding Frame 1
Product Name
aspartyl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -7.62
Kyte-Doolittle Hydrophobicity Value -0.346
Molecular Weight (kDa) 67461.4
Isoelectric Point (pI) 6.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Extracellular Class 1
quantitative mass spectrometry evidence
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002578 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL0644
Search term: aspS

Human Homologs

Ensembl 97, assembly GRCh38.p12
aspartyl-tRNA synthetase 2, mitochondrial [Source:HGNC Symbol;Acc:HGNC:25538]
E-value: 1.7e-111
Percent Identity: 38.2

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268