Burkholderia pseudomallei K96243, BPSL0408

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL0408
Name
Replicon chromosome 1
Genomic location 442663 - 443874 (+ strand)

Cross-References

RefSeq YP_107034.1
GI 53718048
Entrez 3091693
GI 53718048
NCBI Locus Tag BPSL0408
RefSeq YP_107034.1,GeneID
UniProtKB Acc Q63XY1
UniProtKB ID Q63XY1_BURPS

Product

Feature Type CDS
Coding Frame 1
Product Name
penicillin-binding protein 6
Synonyms
Evidence for Translation
Charge (pH 7) 7.41
Kyte-Doolittle Hydrophobicity Value -0.116
Molecular Weight (kDa) 43305.4
Isoelectric Point (pI) 9.53

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 1
quantitative mass spectrometry evidence
Extracellular Class 3
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 385 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002734 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL0408

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268