Burkholderia pseudomallei K96243, BPSL0121 (def)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL0121
Name
def
Replicon chromosome 1
Genomic location 136513 - 137016 (+ strand)

Cross-References

RefSeq YP_106748.1
GI 53717762
Entrez 3093438
GI 53717762
INSDC CAH34107.1
NCBI Locus Tag BPSL0121
RefSeq YP_106748.1,GeneID
UniParc UPI000043AACC
UniProtKB Acc Q63YR7
UniProtKB ID Q63YR7_BURPS
UniRef100 UniRef100_Q3JXE2
UniRef50 UniRef50_Q8Z1W9
UniRef90 UniRef90_A2S8G8

Product

Feature Type CDS
Coding Frame 1
Product Name
peptide deformylase
Synonyms
Evidence for Translation
Charge (pH 7) -1.89
Kyte-Doolittle Hydrophobicity Value -0.220
Molecular Weight (kDa) 18981.0
Isoelectric Point (pI) 6.36

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5J46 HYDROLASE 03/31/16 Crystal structure of a Peptide Deformylase from Burkholderia multivorans BURKHOLDERIA MULTIVORANS (STRAIN ATCC 17616 / 249) 1.95 X-RAY DIFFRACTION 93.4

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 587 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002955 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL0121
Search term: def

References

No references are associated with this feature.