Burkholderia pseudomallei K96243, BPSL0080 (trmE)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL0080
Name
trmE
Replicon chromosome 1
Genomic location 90964 - 92367 (+ strand)

Cross-References

RefSeq YP_106706.1
GI 53717720
Entrez 3093677
GI 53717720
INSDC CAH34064.1
NCBI Locus Tag BPSL0080
RefSeq YP_106706.1,GeneID
UniParc UPI000043AAA3
UniProtKB Acc Q63YV9
UniProtKB ID MNME_BURPS
UniRef100 UniRef100_A3MS17
UniRef50 UniRef50_Q0KFG6
UniRef90 UniRef90_Q2STM2

Product

Feature Type CDS
Coding Frame 1
Product Name
tRNA modification GTPase TrmE
Synonyms
Evidence for Translation
Charge (pH 7) -13.96
Kyte-Doolittle Hydrophobicity Value 0.060
Molecular Weight (kDa) 49452.6
Isoelectric Point (pI) 5.15

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 611 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002983 (653 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL0080
Search term: trmE

Human Homologs

Ensembl 97, assembly GRCh38.p12
GTP binding protein 3, mitochondrial [Source:HGNC Symbol;Acc:HGNC:14880]
E-value: 5.2e-60
Percent Identity: 37.8

Human Homologs

Ensembl 97, assembly GRCh38.p12
GTP binding protein 3, mitochondrial [Source:HGNC Symbol;Acc:HGNC:14880]
E-value: 5.2e-60
Percent Identity: 37.8

References

No references are associated with this feature.