Burkholderia pseudomallei K96243, BPSL0075a (rpmH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia pseudomallei K96243 - Assembly GCF_000011545.1
GCF_000011545.1|latest
Locus Tag
BPSL0075a
Name
rpmH
Replicon chromosome 1
Genomic location 87398 - 87532 (+ strand)

Cross-References

RefSeq YP_106701.1
GI 53717715
Entrez 3094113
GI 53717715
INSDC CAH34059.1
NCBI Locus Tag BPSL0075a
RefSeq YP_106701.1,GeneID
UniParc UPI00002D2D2E
UniProtKB Acc Q63YW4
UniProtKB ID RL34_BURPS
UniRef100 UniRef100_B1YQK0
UniRef50 UniRef50_Q8A1F6
UniRef90 UniRef90_Q2KTI8

Product

Feature Type CDS
Coding Frame 1
Product Name
50S ribosomal protein L34
Synonyms
Evidence for Translation
Charge (pH 7) 17.21
Kyte-Doolittle Hydrophobicity Value -1.182
Molecular Weight (kDa) 5195.2
Isoelectric Point (pI) 13.16

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Extracellular Class 1
quantitative mass spectrometry evidence
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 480 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002988 (622 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BPSL0075a
Search term: rpmH

References

Quantitative proteomic analysis of Burkholderia pseudomallei Bsa type III secretion system effectors using hypersecreting mutants.
Vander Broek CW, Chalmers KJ, Stevens MP, Stevens JM
Mol Cell Proteomics 2015 Apr;14(4):905-16
PubMed ID: 25635268