Burkholderia cenocepacia H111, I35_RS17890 (atsR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Burkholderia cenocepacia H111
GCF_000236215.2|latest |
| Locus Tag |
I35_RS17890
|
| NCBI Old Locus Tag | I35_0693%2CI35_4263 |
| Name |
atsR
|
| Replicon | chromosome 2 |
| Genomic location | 315812 - 317632 (- strand) |
Cross-References
| RefSeq | WP_006494609.1 |
| GI | 493540734 |
| NCBI Locus Tag | I35_RS17890 |
| NCBI Old Locus Tag | I35_0693%2CI35_4263 |
| RefSeq | WP_006494609.1 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
hybrid two-component system kinase-response regulator protein AtsR
|
| Synonyms |
two-component system sensor histidine kinase/response regulator |
| Evidence for Translation | |
| Charge (pH 7) | 0.11 |
| Kyte-Doolittle Hydrophobicity Value | 0.004 |
| Molecular Weight (kDa) | 67199.8 |
| Isoelectric Point (pI) | 7.03 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Burkholderia Ortholog Group |
BG004546 (629 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: I35_RS17890
Search term: atsR
|
Human Homologs
References
|
The Burkholderia cenocepacia sensor kinase hybrid AtsR is a global regulator modulating quorum-sensing signalling.
Aubert DF, O'Grady EP, Hamad MA, Sokol PA, Valvano MA
Environ Microbiol 2013 Feb;15(2):372-85
PubMed ID: 22830644
|