Burkholderia cenocepacia AU 1054, BCEN_RS00020
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Burkholderia cenocepacia AU 1054
GCF_000014085.1|latest |
| Locus Tag |
BCEN_RS00020
|
| NCBI Old Locus Tag | Bcen_0005 |
| Name |
|
| Replicon | chromosome 1 |
| Genomic location | 5614 - 5892 (+ strand) |
Cross-References
| RefSeq | WP_006401505.1 |
| GI | 493446149 |
| NCBI Locus Tag | BCEN_RS00020 |
| NCBI Old Locus Tag | Bcen_0005 |
| RefSeq | WP_006401505.1 |
Product
| Feature Type | CDS |
| Coding Frame | NA |
| Product Name |
DNA-binding protein HU-alpha
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 8.98 |
| Kyte-Doolittle Hydrophobicity Value | -0.358 |
| Molecular Weight (kDa) | 9605.0 |
| Isoelectric Point (pI) | 10.99 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 6N2L | DNA BINDING PROTEIN | 11/13/18 | Crystal structure of a histone family protein DNA-binding protein from Burkholderia ambifaria | BURKHOLDERIA AMBIFARIA (STRAIN MC40-6) | 1.85 | X-RAY DIFFRACTION | 100.0 |
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Burkholderia Ortholog Group |
BG000052 (653 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: BCEN_RS00020
Search term: DNA-binding protein HU-alpha
|
Human Homologs
References
No references are associated with this feature.