Burkholderia ambifaria AMMD, BAMB_RS16925

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia ambifaria AMMD - Assembly GCF_000203915.1
GCF_000203915.1|latest
Locus Tag
BAMB_RS16925
NCBI Old Locus TagBamb_3356
Name
Replicon chromosome 2
Genomic location 149712 - 150905 (+ strand)

Cross-References

RefSeq WP_041491626.1
GI 753123103
NCBI Locus Tag BAMB_RS16925
NCBI Old Locus Tag Bamb_3356
RefSeq WP_041491626.1

Product

Feature Type CDS
Coding Frame NA
Product Name
O-succinylhomoserine sulfhydrylase
Synonyms
Evidence for Translation
Charge (pH 7) -5.18
Kyte-Doolittle Hydrophobicity Value -0.004
Molecular Weight (kDa) 42863.3
Isoelectric Point (pI) 5.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG003101 (648 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BAMB_RS16925

Human Homologs

Ensembl 97, assembly GRCh38.p12
cystathionine gamma-lyase [Source:HGNC Symbol;Acc:HGNC:2501]
E-value: 2.1e-57
Percent Identity: 37.5

References

No references are associated with this feature.