Burkholderia ambifaria AMMD, BAMB_RS15655 (rqpR)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Burkholderia ambifaria AMMD - Assembly GCF_000203915.1
GCF_000203915.1|latest
Locus Tag
BAMB_RS15655
NCBI Old Locus TagBamb_3100
Name
rqpR
Replicon chromosome 1
Genomic location 3421399 - 3422055 (+ strand)

Cross-References

RefSeq WP_011658169.1
GI 499977451
NCBI Locus Tag BAMB_RS15655
NCBI Old Locus Tag Bamb_3100
RefSeq WP_011658169.1

Product

Feature Type CDS
Coding Frame NA
Product Name
two-component regulatory system, response regulator RqpR
Product Name Confidence: Class 2
Synonyms LuxR family transcriptional regulator
Evidence for Translation
Charge (pH 7) 0.68
Kyte-Doolittle Hydrophobicity Value -0.022
Molecular Weight (kDa) 24005.4
Isoelectric Point (pI) 7.59

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG002880 (654 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BAMB_RS15655
Search term: rqpR

References

A novel two-component system modulates quorum sensing and pathogenicity in Burkholderia cenocepacia.
Cui C, Yang C, Song S, Fu S, Sun X, Yang L, He F, Zhang LH, Zhang Y, Deng Y
Mol Microbiol 2018 Apr;108(1):32-44
PubMed ID: 29363827