Burkholderia cenocepacia K56-2Valvano, BURCENK562V_RS28290
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Burkholderia cenocepacia K56-2Valvano
GCF_000333155.2|latest |
| Locus Tag |
BURCENK562V_RS28290
|
| NCBI Old Locus Tag | BURCENK562V_C6659 |
| Name |
Synonym: bcsA |
| Replicon | ctg7180000002941 |
| Genomic location | 462214 - 463059 (- strand) |
| Comment | Part of the T6SS gene cluster |
Cross-References
| RefSeq | WP_006488977.1 |
| GI | 493535018 |
| GI | 493535018 |
| NCBI Locus Tag | BURCENK562V_RS28290 |
| NCBI Old Locus Tag | BURCENK562V_C6659 |
| RefSeq | WP_006488977.1 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
serine-type D-Ala-D-Ala carboxypeptidase domain protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 10.44 |
| Kyte-Doolittle Hydrophobicity Value | -0.109 |
| Molecular Weight (kDa) | 31344.0 |
| Isoelectric Point (pI) | 10.29 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Burkholderia Ortholog Group |
BG000379 (642 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: BURCENK562V_RS28290
|
Human Homologs
References
|
A novel sensor kinase-response regulator hybrid controls biofilm formation and type VI secretion system activity in Burkholderia cenocepacia.
Aubert DF, Flannagan RS, Valvano MA
Infect Immun 2008 May;76(5):1979-91
PubMed ID: 18316384
|
|
Anchoring the type VI secretion system to the peptidoglycan: TssL, TagL, TagP... what else?
Aschtgen MS, Thomas MS, Cascales E
Virulence 2010 Nov-Dec;1(6):535-40
PubMed ID: 21178498
|
|
Quantification of type VI secretion system activity in macrophages infected with Burkholderia cenocepacia.
Aubert DF, Hu S, Valvano MA
Microbiology 2015 Nov;161(11):2161-73
PubMed ID: 26364149
|