Strain |
Burkholderia cenocepacia K56-2Valvano
GCF_000333155.2|latest |
Locus Tag |
BURCENK562V_RS30450
|
NCBI Old Locus Tag | BURCENK562V_C6036 |
Name |
rpoE
|
Replicon | ctg7180000002940C |
Genomic location | 370532 - 371131 (+ strand) |
RefSeq | WP_006490873.1 |
GI | 493536937 |
GI | 493536937 |
NCBI Locus Tag | BURCENK562V_RS30450 |
NCBI Old Locus Tag | BURCENK562V_C6036 |
RefSeq | WP_006490873.1 |
Feature Type | CDS |
Coding Frame | 1 |
Product Name |
RNA polymerase sigma factor RpoE
|
Synonyms | |
Evidence for Translation | |
Charge (pH 7) | -2.79 |
Kyte-Doolittle Hydrophobicity Value | -0.372 |
Molecular Weight (kDa) | 22593.5 |
Isoelectric Point (pI) | 5.21 |
Individual Mappings | |
Additional evidence for subcellular localization |
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Source 1 | |
Database | BGD |
Category | Alternative Sigma factors |
Evidence |
ECO:0000315
mutant phenotype evidence used in manual assertion
|
Host Organism | Mus musculus |
Notes | rpoE mutant cannot delay phagolysosomal fusion in mouse RAW 264.7 macrophages |
Reference | 18227267 |
Burkholderia Ortholog Group |
BG000968 (655 members) |
Putative Inparalogs | None Found |
STRING database | Search for predicted protein-protein interactions using:
Search term: BURCENK562V_RS30450
Search term: rpoE
Search term: RNA polymerase sigma factor RpoE
|
Burkholderia cenocepacia requires RpoE for growth under stress conditions and delay of phagolysosomal fusion in macrophages.
Flannagan RS, Valvano MA
Microbiology 2008 Feb;154(Pt 2):643-653
PubMed ID: 18227267
|