Burkholderia cenocepacia J2315, BCAS0729 (deoA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAS0729
NCBI Locus TagQU43_RS72285
Name
deoA
Replicon chromosome 3
Genomic location 799984 - 801300 (- strand)

Cross-References

RefSeq WP_006485638.1
GI 197295559
Entrez 6803969
GI 197295559
INSDC CAR57663.1
NCBI Locus Tag QU43_RS72285
NCBI Old Locus Tag BCAS0729
RefSeq WP_006485638.1,GeneID
UniParc UPI00017BB292
UniProtKB Acc B4EPB7
UniProtKB ID TYPH_BURCJ
UniRef100 UniRef100_B4EPB7
UniRef50 UniRef50_Q9KPL8
UniRef90 UniRef90_Q1BV59

Product

Feature Type CDS
Coding Frame 1
Product Name
thymidine phosphorylase
Synonyms
Evidence for Translation
Charge (pH 7) -6.42
Kyte-Doolittle Hydrophobicity Value 0.170
Molecular Weight (kDa) 45425.6
Isoelectric Point (pI) 5.47

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 329 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG006933 (550 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAS0729
Search term: deoA

Human Homologs

Ensembl 97, assembly GRCh38.p12
thymidine phosphorylase [Source:HGNC Symbol;Acc:HGNC:3148]
E-value: 6.4e-76
Percent Identity: 42.3
Ensembl 97, assembly GRCh38.p12
thymidine phosphorylase [Source:HGNC Symbol;Acc:HGNC:3148]
E-value: 6.4e-76
Percent Identity: 42.3
Ensembl 97, assembly GRCh38.p12
thymidine phosphorylase [Source:HGNC Symbol;Acc:HGNC:3148]
E-value: 6.4e-76
Percent Identity: 42.3
Ensembl 97, assembly GRCh38.p12
thymidine phosphorylase [Source:HGNC Symbol;Acc:HGNC:3148]
E-value: 6.4e-76
Percent Identity: 42.3

References

No references are associated with this feature.