Burkholderia cenocepacia J2315, BCAL1889 (rumA)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL1889
NCBI Locus Tag	QU43_RS45990
Name	rumA
Replicon	chromosome 1
Genomic location	2085076 - 2086473 (- strand)

Cross-References

RefSeq	WP_006484456.1
GI	206560252
Entrez	6932097
GI	206560252
INSDC	CAR52189.1
NCBI Locus Tag	QU43_RS45990
NCBI Old Locus Tag	BCAL1889
RefSeq	WP_006484456.1,GeneID
UniParc	UPI00017B95AD
UniProtKB Acc	B4EAX4
UniProtKB ID	B4EAX4_BURCJ
UniRef100	UniRef100_B4EAX4
UniRef50	UniRef50_Q39FQ4
UniRef90	UniRef90_Q39FQ4

Product

Feature Type	CDS
Coding Frame	1
Product Name	23S rRNA 5-methyluridine methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7)	5.21
Kyte-Doolittle Hydrophobicity Value	-0.123
Molecular Weight (kDa)	51039.3
Isoelectric Point (pI)	8.28

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 549 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG001654 (652 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL1889 Search term: rumA Search term: 23S rRNA 5-methyluridine methyltransferase

Human Homologs

References