Burkholderia cenocepacia J2315, BCAL1883 (hisS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL1883
NCBI Locus TagQU43_RS45960
Name
hisS
Replicon chromosome 1
Genomic location 2078486 - 2079826 (- strand)

Cross-References

RefSeq WP_006483311.1
GI 206560246
Entrez 6932093
GI 206560246
INSDC CAR52183.1
NCBI Locus Tag QU43_RS45960
NCBI Old Locus Tag BCAL1883
RefSeq WP_006483311.1,GeneID
UniParc UPI0000E9627A
UniProtKB Acc B4EAW8
UniProtKB ID SYH_BURCJ
UniRef100 UniRef100_B1JT91
UniRef50 UniRef50_Q7N705
UniRef90 UniRef90_Q2SWE3

Product

Feature Type CDS
Coding Frame 1
Product Name
histidyl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -18.13
Kyte-Doolittle Hydrophobicity Value -0.287
Molecular Weight (kDa) 49598.9
Isoelectric Point (pI) 4.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4E51 LIGASE 03/13/12 Crystal structure of a histidyl-tRNA synthetase HisRS from Burkholderia thailandensis bound to histidine BURKHOLDERIA THAILANDENSIS 2.65 X-RAY DIFFRACTION 91.9

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 667 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001648 (653 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL1883
Search term: hisS

Human Homologs

References

No references are associated with this feature.