Burkholderia cenocepacia J2315, BCAL1509 (truB)

Gene Feature Overview

Strain	Burkholderia cenocepacia J2315 GCF_000009485.1|latest
Locus Tag	BCAL1509
NCBI Locus Tag	QU43_RS44055
Name	truB
Replicon	chromosome 1
Genomic location	1668139 - 1669071 (+ strand)

Cross-References

RefSeq	WP_006490683.1
GI	206559875
Entrez	6931790
GI	206559875
INSDC	CAR51808.1
NCBI Locus Tag	QU43_RS44055
NCBI Old Locus Tag	BCAL1509
RefSeq	WP_006490683.1,GeneID
UniParc	UPI00017B9446
UniProtKB Acc	B4E7L3
UniProtKB ID	B4E7L3_BURCJ
UniRef100	UniRef100_B4E7L3
UniRef50	UniRef50_Q62KL1
UniRef90	UniRef90_Q39H28

Product

Feature Type	CDS
Coding Frame	1
Product Name	tRNA pseudouridine synthase B
Synonyms
Evidence for Translation
Charge (pH 7)	-0.94
Kyte-Doolittle Hydrophobicity Value	-0.072
Molecular Weight (kDa)	33353.8
Isoelectric Point (pI)	6.67

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 658 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group	BG001330 (655 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BCAL1509 Search term: truB Search term: tRNA pseudouridine synthase B

Human Homologs

Ensembl 97, assembly GRCh38.p12

ENSP00000298746 TruB pseudouridine synthase family member 1 [Source:HGNC Symbol;Acc:HGNC:16060] E-value: 2.2e-30 Percent Identity: 37.3

References