Burkholderia cenocepacia J2315, BCAL1484 (rplT)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL1484
NCBI Locus TagQU43_RS43925
Name
rplT
Replicon chromosome 1
Genomic location 1640305 - 1640664 (+ strand)

Cross-References

RefSeq WP_004192938.1
GI 206559850
Entrez 6934090
GI 206559850
INSDC CAR51783.1
NCBI Locus Tag QU43_RS43925
NCBI Old Locus Tag BCAL1484
RefSeq WP_004192938.1,GeneID
UniParc UPI000025F4B3
UniProtKB Acc B4E7I8
UniProtKB ID RL20_BURCJ
UniRef100 UniRef100_Q1BWV0
UniRef50 UniRef50_A0QHC1
UniRef90 UniRef90_B1YP16

Product

Feature Type CDS
Coding Frame 1
Product Name
50S ribosomal protein L20
Synonyms
Evidence for Translation
Charge (pH 7) 24.46
Kyte-Doolittle Hydrophobicity Value -0.355
Molecular Weight (kDa) 13644.1
Isoelectric Point (pI) 12.19

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001309 (656 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL1484
Search term: rplT

Human Homologs

Ensembl 97, assembly GRCh38.p12
mitochondrial ribosomal protein L20 [Source:HGNC Symbol;Acc:HGNC:14478]
E-value: 3.6e-13
Percent Identity: 39.2

References

No references are associated with this feature.