Burkholderia cenocepacia J2315, BCAL1473 (scoB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL1473
NCBI Locus TagQU43_RS43865
Name
scoB
Replicon chromosome 1
Genomic location 1629142 - 1629783 (+ strand)

Cross-References

RefSeq WP_006488513.1
GI 206559840
Entrez 6934133
GI 206559840
INSDC CAR51772.1
NCBI Locus Tag QU43_RS43865
NCBI Old Locus Tag BCAL1473
RefSeq WP_006488513.1,GeneID
UniParc UPI00017B93C1
UniProtKB Acc B4E7H8
UniProtKB ID B4E7H8_BURCJ
UniRef100 UniRef100_B4E7H8
UniRef50 UniRef50_B4E7H8
UniRef90 UniRef90_B4E7H8

Product

Feature Type CDS
Coding Frame 1
Product Name
succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B
Synonyms
Evidence for Translation
Charge (pH 7) -12.07
Kyte-Doolittle Hydrophobicity Value 0.270
Molecular Weight (kDa) 22132.3
Isoelectric Point (pI) 4.28

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 275 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001298 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL1473
Search term: scoB

Human Homologs

Ensembl 97, assembly GRCh38.p12
3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527]
E-value: 8.8e-63
Percent Identity: 57.7
Ensembl 97, assembly GRCh38.p12
3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527]
E-value: 8.8e-63
Percent Identity: 57.7

References

No references are associated with this feature.