Burkholderia cenocepacia J2315, BCAL1260 (carA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL1260
NCBI Locus TagQU43_RS42795
Name
carA
Replicon chromosome 1
Genomic location 1369492 - 1370637 (+ strand)

Cross-References

RefSeq WP_006490550.1
GI 206559637
Entrez 6931590
GI 206559637
INSDC CAR51562.1
NCBI Locus Tag QU43_RS42795
NCBI Old Locus Tag BCAL1260
RefSeq WP_006490550.1,GeneID
UniParc UPI00017B9472
UniProtKB Acc B4EEJ7
UniProtKB ID B4EEJ7_BURCJ
UniRef100 UniRef100_B4EEJ7
UniRef50 UniRef50_P0A6F2
UniRef90 UniRef90_Q2SUV4

Product

Feature Type CDS
Coding Frame 1
Product Name
carbamoyl phosphate synthase small subunit
Synonyms
Evidence for Translation
Charge (pH 7) -6.26
Kyte-Doolittle Hydrophobicity Value -0.089
Molecular Weight (kDa) 40915.1
Isoelectric Point (pI) 6.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 629 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001127 (655 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL1260
Search term: carA

Human Homologs

Ensembl 97, assembly GRCh38.p12
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:HGNC Symbol;Acc:HGNC:1424]
E-value: 2.6e-65
Percent Identity: 38.0
Ensembl 97, assembly GRCh38.p12
carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase [Source:HGNC Symbol;Acc:HGNC:1424]
E-value: 2.6e-65
Percent Identity: 38.0

References

No references are associated with this feature.