Burkholderia cenocepacia J2315, BCAL1047 (pdxY)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL1047
NCBI Locus TagQU43_RS41805
Name
pdxY
Replicon chromosome 1
Genomic location 1133937 - 1134797 (- strand)

Cross-References

RefSeq WP_006484315.1
GI 206559434
Entrez 6933964
GI 206559434
INSDC CAR51350.1
NCBI Locus Tag QU43_RS41805
NCBI Old Locus Tag BCAL1047
RefSeq WP_006484315.1,GeneID
UniParc UPI00017B91C6
UniProtKB Acc B4ECK9
UniProtKB ID B4ECK9_BURCJ
UniRef100 UniRef100_B4ECK9
UniRef50 UniRef50_P77150
UniRef90 UniRef90_Q2SXQ4

Product

Feature Type CDS
Coding Frame 1
Product Name
pyridoxamine kinase
Synonyms
Evidence for Translation
Charge (pH 7) 0.28
Kyte-Doolittle Hydrophobicity Value -0.028
Molecular Weight (kDa) 31196.5
Isoelectric Point (pI) 7.06

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
5TQI TRANSFERASE 10/24/16 Crystal structure of a pyridoxal kinase from Burkholderia multivorans BURKHOLDERIA MULTIVORANS (STRAIN ATCC 17616 / 249) 1.5 X-RAY DIFFRACTION 95.8

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 141 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG001010 (650 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL1047
Search term: pdxY

Human Homologs

References

No references are associated with this feature.