Burkholderia cenocepacia J2315, BCAL1005 (rnc2)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Burkholderia cenocepacia J2315
GCF_000009485.1|latest
Locus Tag
BCAL1005
NCBI Locus TagQU43_RS41590
Name
rnc2
Replicon chromosome 1
Genomic location 1092488 - 1093717 (+ strand)

Cross-References

RefSeq WP_012492435.1
GI 206559398
Entrez 6933783
GI 206559398
NCBI Locus Tag QU43_RS41590
NCBI Old Locus Tag BCAL1005
RefSeq WP_012492435.1,GeneID
UniProtKB Acc B4EA48
UniProtKB ID B4EA48_BURCJ

Product

Feature Type CDS
Coding Frame 1
Product Name
ribonuclease III
Synonyms
Evidence for Translation
Charge (pH 7) 5.36
Kyte-Doolittle Hydrophobicity Value -0.354
Molecular Weight (kDa) 42752.6
Isoelectric Point (pI) 9.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 589 genera

Orthologs/Comparative Genomics

Burkholderia Ortholog Group BG000975 (653 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: BCAL1005
Search term: rnc2
Search term: ribonuclease III

Human Homologs

Ensembl 97, assembly GRCh38.p12
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 2.7e-12
Percent Identity: 26.9
Ensembl 97, assembly GRCh38.p12
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 2.7e-12
Percent Identity: 26.9
Ensembl 97, assembly GRCh38.p12
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 2.7e-12
Percent Identity: 26.9
Ensembl 97, assembly GRCh38.p12
drosha ribonuclease III [Source:HGNC Symbol;Acc:HGNC:17904]
E-value: 2.7e-12
Percent Identity: 26.9

References

No references are associated with this feature.