Burkholderia cenocepacia J2315, BCAL0350 (tagF)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain | Burkholderia cenocepacia J2315 |
| Locus Tag |
BCAL0350
|
| NCBI Locus Tag | QU43_RS38285 |
| Name |
tagF
Synonym: bcsC |
| Replicon | chromosome 1 |
| Genomic location | 377950 - 378939 (- strand) |
| Comment | Part of the T6SS gene cluster |
Cross-References
| RefSeq | WP_006483243.1 |
| GI | 206558756 |
| Entrez | 6930894 |
| GI | 206558756 |
| INSDC | CAR50660.1 |
| NCBI Locus Tag | QU43_RS38285 |
| NCBI Old Locus Tag | BCAL0350 |
| RefSeq | WP_006483243.1,GeneID |
| UniParc | UPI00017B912E |
| UniProtKB Acc | B4E6S2 |
| UniProtKB ID | B4E6S2_BURCJ |
| UniRef100 | UniRef100_B4E6S2 |
| UniRef50 | UniRef50_D8N088 |
| UniRef90 | UniRef90_B4E6S2 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion system-associated protein TagF
|
| Synonyms |
hypothetical protein |
| Evidence for Translation | |
| Charge (pH 7) | -6.11 |
| Kyte-Doolittle Hydrophobicity Value | 0.056 |
| Molecular Weight (kDa) | 36149.1 |
| Isoelectric Point (pI) | 6.08 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 16 genera
|
Orthologs/Comparative Genomics
| Burkholderia Ortholog Group |
BG000377 (643 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: BCAL0350
Search term: tagF
Search term: type VI secretion system-associated protein TagF
|